My partner is also dependent on my AINP application also, but in my AINP checklist they only requested my ECA original credentials. Have you had you received a checklist from Alberta?
I'm sorry, but I don't really understand '...she didn't complete her WES' bit. Do you mean you're now waiting for her ECA from WES? Either way, you should always amend your Express Entry to show the most up-to-date information, so only put in what your wife has completed study-wise.
Congrats on getting the NOI and good luck with the application.